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1

One core, two shells: bacterial and eukaryotic ribosomes

Melnikov, Sergey, Ben-Shem, Adam, Garreau de Loubresse, Nicolas, Jenner, Lasse, Yusupova, Gulnara, Yusupov, Marat

Journal:

Nature Structural and Molecular Biology

Year:

2012

Language:

english

File:

PDF, 2.58 MB

english, 2012

2

High-Resolution Structure of the Eukaryotic 80S Ribosome

Yusupova, Gulnara, Yusupov, Marat

Journal:

Annual Review of Biochemistry

Year:

2014

Language:

english

File:

PDF, 1.85 MB

english, 2014

3

Structured mRNAs Regulate Translation Initiation by Binding to the Platform of the Ribosome

Stefano Marzi, Alexander G. Myasnikov, Alexander Serganov, Chantal Ehresmann, Pascale Romby, Marat Yusupov, Bruno P. Klaholz

Journal:

Year:

2007

Language:

english

File:

PDF, 1.69 MB

english, 2007

4

Novel base-pairing interactions at the tRNA wobble position crucial for accurate reading of the genetic code

Rozov, Alexey, Demeshkina, Natalia, Khusainov, Iskander, Westhof, Eric, Yusupov, Marat, Yusupova, Gulnara

Journal:

Nature Communications

Year:

2016

Language:

english

File:

PDF, 1.61 MB

english, 2016

5

Structural insights into the role of diphthamide on elongation factor 2 in messenger RNA reading frame maintenance

Pellegrino, Simone, Demeshkina, Natalia, Mancera-Martinez, Eder, Melnikov, Sergey, Simonetti, Angelita, Myasnikov, Alexander, Yusupov, Marat, Yusupova, Gulnara, Hashem, Yaser

Journal:

Journal of Molecular Biology

Year:

2018

Language:

english

File:

PDF, 16.23 MB

english, 2018

6

Messenger RNA conformations in the ribosomal E site revealed by X-ray crystallography

Jenner, Lasse, Rees, Bernard, Yusupov, Marat, Yusupova, Gulnara

Journal:

Year:

2007

Language:

english

File:

PDF, 200 KB

english, 2007

7

Tautomeric G•U pairs within the molecular ribosomal grip and fidelity of decoding in bacteria

Rozov, Alexey, Wolff, Philippe, Grosjean, Henri, Yusupov, Marat, Yusupova, Gulnara, Westhof, Eric

Journal:

Nucleic Acids Research

Year:

2018

Language:

english

File:

PDF, 4.90 MB

english, 2018

8

Interactions of the ribosome with mRNA and tRNA

Natalia Demeshkina, Lasse Jenner, Gulnara Yusupova, Marat Yusupov

Journal:

Current Opinion in Structural Biology

Year:

2010

Language:

english

File:

PDF, 832 KB

english, 2010

9

Structural insights into the translational infidelity mechanism

Rozov, Alexey, Demeshkina, Natalia, Westhof, Eric, Yusupov, Marat, Yusupova, Gulnara

Journal:

Nature Communications

Year:

2015

Language:

english

File:

PDF, 1.55 MB

english, 2015

10

Insights into the origin of the nuclear localization signals in conserved ribosomal proteins

Melnikov, Sergey, Ben-Shem, Adam, Yusupova, Gulnara, Yusupov, Marat

Journal:

Nature Communications

Year:

2015

Language:

english

File:

PDF, 672 KB

english, 2015

11

Amicoumacin A induces cancer cell death by targeting the eukaryotic ribosome

Prokhorova, Irina V., Akulich, Kseniya A., Makeeva, Desislava S., Osterman, Ilya A., Skvortsov, Dmitry A., Sergiev, Petr V., Dontsova, Olga A., Yusupova, Gulnara, Yusupov, Marat M., Dmitriev, Sergey E

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 1.06 MB

english, 2016

12

Solution structure of the N-terminal domain of the Staphylococcus aureus hibernation promoting factor

Usachev, Konstantin S., Validov, Shamil Z., Khusainov, Iskander Sh., Varfolomeev, Alexander A., Klochkov, Vladimir V., Aganov, Albert V., Yusupov, Marat M.

Journal:

Journal of Biomolecular NMR

Year:

2019

Language:

english

File:

PDF, 1.03 MB

english, 2019

13

Crystal structure of the 80S yeast ribosome

Lasse Jenner, Sergey Melnikov, Nicolas Garreau de Loubresse, Adam Ben-Shem, Madina Iskakova, Alexandre Urzhumtsev, Arturas Meskauskas, Jonathan Dinman, Gulnara Yusupova, Marat Yusupov

Journal:

Current Opinion in Structural Biology

Year:

2012

Language:

english

File:

PDF, 2.90 MB

english, 2012

14

Editorial

Wilson, Daniel, Spahn, Christian, Yusupov, Marat

Journal:

Journal of Molecular Biology

Year:

2016

Language:

english

File:

PDF, 83 KB

english, 2016

15

Molecular insights into protein synthesis with proline residues

Melnikov, Sergey, Mailliot, Justine, Rigger, Lukas, Neuner, Sandro, Shin, Byung‐Sik, Yusupova, Gulnara, Dever, Thomas E, Micura, Ronald, Yusupov, Marat

Journal:

Year:

2016

Language:

english

File:

PDF, 941 KB

english, 2016

16

Backbone and side chain NMR assignments for the ribosome Elongation Factor P (EF-P) from Staphylococcus aureus

Usachev, Konstantin S., Golubev, Alexander A., Validov, Shamil Z., Klochkov, Vladimir V., Aganov, Albert V., Khusainov, Iskander Sh., Yusupov, Marat M.

Journal:

Biomolecular NMR Assignments

Year:

2018

Language:

english

File:

PDF, 1.35 MB

english, 2018

17

The Path of Messenger RNA through the Ribosome

Gulnara Zh. Yusupova, Marat M. Yusupov, J.H.D. Cate, Harry F. Noller

Journal:

Year:

2001

Language:

english

File:

PDF, 844 KB

english, 2001

18

Backbone and side chain NMR assignments for the ribosome binding factor A (RbfA) from Staphylococcus aureus

Blokhin, Dmitriy S., Bikmullin, Aydar G., Nurullina, Liliya I., Garaeva, Natalia S., Validov, Shamil Z., Klochkov, Vladimir V., Aganov, Albert V., Khusainov, Iskander Sh., Yusupov, Marat M., Usachev,

Journal:

Biomolecular NMR Assignments

Year:

2018

Language:

english

File:

PDF, 1012 KB

english, 2018

19

Conformational transition of initiation factor 2 from the GTP- to GDP-bound state visualized on the ribosome

Myasnikov, Alexander G, Marzi, Stefano, Simonetti, Angelita, Giuliodori, Anna Maria, Gualerzi, Claudio O, Yusupova, Gulnara, Yusupov, Marat, Klaholz, Bruno P

Journal:

Nature Structural and Molecular Biology

Year:

2005

Language:

english

File:

PDF, 583 KB

english, 2005

20

New structural insights into the decoding mechanism: Translation infidelity via a G·U pair with Watson–Crick geometry

Demeshkina, Natalia, Jenner, Lasse, Westhof, Eric, Yusupov, Marat, Yusupova, Gulnara

Journal:

Year:

2013

Language:

english

File:

PDF, 1.87 MB

english, 2013

21

Sequence of tRNA Asp form Thermus thermophilus HB8

Keith, Geèrard, Yusupov, Marat, Brion, christian, Moras, Dino, Kern, Daniel

Journal:

Nucleic Acids Research

Year:

1993

Language:

english

File:

PDF, 73 KB

english, 1993

22

The ribosome prohibits the G•U wobble geometry at the first position of the codon–anticodon helix

Rozov, Alexey, Westhof, Eric, Yusupov, Marat, Yusupova, Gulnara

Journal:

Nucleic Acids Research

Year:

2016

Language:

english

File:

PDF, 5.92 MB

english, 2016

23

Fidelity of translation: structural view

Rozov, Alexey, Demeshkina, Natalia, Westhof, Eric, Yusupov, Marat, Yusupova, Gulnara

Journal:

Acta Crystallographica Section A Foundations and Advances

Year:

2015

File:

PDF, 347 KB

2015

24

The fidelity of translation initiation: reciprocal activities of eIF1, IF3 and YciH

Lomakin, Ivan B, Shirokikh, Nikolay E, Yusupov, Marat M, Hellen, Christopher U T, Pestova, Tatyana V

Journal:

The EMBO Journal

Year:

2005

Language:

english

File:

PDF, 706 KB

english, 2005

25

Synthesis and ribosome binding properties of model mRNAs modified with undecagold cluster

Skripkin, Eugene, Yusupova, Gulnara, Yusupov, Marat, Kessler, Pascal, Ehresmann, Chantal, Ehresmann, Bernard

Journal:

Bioconjugate Chemistry

Year:

1993

Language:

english

File:

PDF, 1.16 MB

english, 1993

26

Ribosomes Structure and Mechanisms in Regulation of Protein Synthesis Part I

Wilson, Daniel, Spahn, Christian, Yusupov, Marat

Journal:

Journal of Molecular Biology

Year:

2016

Language:

english

File:

PDF, 85 KB

english, 2016

27

Crystal structure of eukaryotic ribosome and its complexes with inhibitors

Yusupova, Gulnara, Yusupov, Marat

Journal:

Philosophical Transactions Biological Sciences

Year:

2017

Language:

english

File:

PDF, 1.40 MB

english, 2017

28

Structure of bacterial and yeast ribosome

Journal:

Acta Crystallographica Section A Foundations of Crystallography

Year:

2013

Language:

english

File:

PDF, 255 KB

english, 2013

29

Are there proteins between the ribosomal subunits?: Hot tritium bombardment experiments

Marat M. Yusupov, Alexander S. Spirin

Journal:

Year:

1986

Language:

english

File:

PDF, 506 KB

english, 1986

30

Preliminary X-ray investigation of 70 S ribosome crystals from Thermus thermophilus

Trakhanov, Sergei, Yusupov, Marat, Shirokov, Vladimir, Garber, Marina, Mitschler, André, Ruff, Marc, Thierry, Jean-Claude, Moras, Dino

Journal:

Journal of Molecular Biology

Year:

1989

Language:

english

File:

PDF, 185 KB

english, 1989

31

NMR assignments of the N-terminal domain of Staphylococcus aureus hibernation promoting factor (SaHPF)

Usachev, Konstantin S., Ayupov, Rustam Kh., Validov, Shamil Z., Khusainov, Iskander Sh., Yusupov, Marat M.

Journal:

Biomolecular NMR Assignments

Year:

2017

Language:

english

File:

PDF, 1.14 MB

english, 2017

32

Structural rearrangements of the ribosome at the tRNA proofreading step

Jenner, Lasse, Demeshkina, Natalia, Yusupova, Gulnara, Yusupov, Marat

Journal:

Nature Structural and Molecular Biology

Year:

2010

Language:

english

File:

PDF, 1.97 MB

english, 2010

33

Structural aspects of messenger RNA reading frame maintenance by the ribosome

Jenner, Lasse B, Demeshkina, Natalia, Yusupova, Gulnara, Yusupov, Marat

Journal:

Nature Structural and Molecular Biology

Year:

2010

Language:

english

File:

PDF, 1.78 MB

english, 2010

34

Crystal structures of the uL3 mutant ribosome: illustration of the importance of ribosomal proteins for translation efficiency

Mailliot, Justine, de Loubresse, Nicolas Garreau, Yusupova, Gulnara, Meskauskas, Arturas, Dinman, Jonathan D., Yusupov, Marat

Journal:

Journal of Molecular Biology

Year:

2016

Language:

english

File:

PDF, 700 KB

english, 2016

35

Structure of the 30S translation initiation complex

Simonetti, Angelita, Marzi, Stefano, Myasnikov, Alexander G., Fabbretti, Attilio, Yusupov, Marat, Gualerzi, Claudio O., Klaholz, Bruno P.

Journal:

Year:

2008

Language:

english

File:

PDF, 715 KB

english, 2008

36

Crystal structure of hypusine-containing translation factor eIF5A bound to a rotated eukaryotic ribosome

Melnikov, Sergey, Mailliot, Justine, Shin, Byung-Sik, Rigger, Lukas, Yusupova, Gulnara, Micura, Ronald, Dever, Thomas E., Yusupov, Marat

Journal:

Journal of Molecular Biology

Year:

2016

Language:

english

File:

PDF, 1.07 MB

english, 2016

37

Structures and dynamics of hibernating ribosomes from Staphylococcus aureus mediated by intermolecular interactions of HPF

Khusainov, Iskander, Vicens, Quentin, Ayupov, Rustam, Usachev, Konstantin, Myasnikov, Alexander, Simonetti, Angelita, Validov, Shamil, Kieffer, Bruno, Yusupova, Gulnara, Yusupov, Marat, Hashem, Yaser

Journal:

The EMBO Journal

Year:

2017

Language:

english

File:

PDF, 5.04 MB

english, 2017

38

New Structural Insights into Translational Miscoding

Rozov, Alexey, Demeshkina, Natalia, Westhof, Eric, Yusupov, Marat, Yusupova, Gulnara

Journal:

Trends in Biochemical Sciences

Year:

2016

Language:

english

File:

PDF, 5.35 MB

english, 2016

39

Cryo-EM structure of the hibernating Thermus thermophilus 100S ribosome reveals a protein-mediated dimerization mechanism

Flygaard, Rasmus Kock, Boegholm, Niels, Yusupov, Marat, Jenner, Lasse B.

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 3.60 MB

english, 2018

40

The multiple flavors of GoU pairs in RNA

Westhof, Eric, Yusupov, Marat, Yusupova, Gulnara

Journal:

Journal of Molecular Recognition

Year:

2019

Language:

english

File:

PDF, 610 KB

english, 2019

41

A new understanding of the decoding principle on the ribosome

Demeshkina, Natalia, Jenner, Lasse, Westhof, Eric, Yusupov, Marat, Yusupova, Gulnara

Journal:

Year:

2012

Language:

english

File:

PDF, 1.77 MB

english, 2012

42

Translocation of tRNA during protein synthesis

Harry F. Noller, Marat M. Yusupov, Gulnara Z. Yusupova, Albion Baucom, J.H.D. Cate

Journal:

Year:

2002

Language:

english

File:

PDF, 468 KB

english, 2002

43

Towards to the Asphaltene Structure by Electron Paramagnetic Resonance Relaxation Studies at High Fields (3.4 T)

Mamin, Georgy V., Gafurov, Marat R, Yusupov, Roman V., Gracheva, Irina N., Ganeeva, Yulia M., Yusupova, Tatiana N., Orlinskii, Sergei B.

Journal:

Year:

2016

Language:

english

File:

PDF, 409 KB

english, 2016

44

Ribosomal position and contacts of mRNA in eukaryotic translation initiation complexes

Pisarev, Andrey V, Kolupaeva, Victoria G, Yusupov, Marat M, Hellen, Christopher UT, Pestova, Tatyana V

Journal:

The EMBO Journal

Year:

2008

Language:

english

File:

PDF, 460 KB

english, 2008

45

Structural basis for messenger RNA movement on the ribosome

Yusupova, Gulnara, Jenner, Lasse, Rees, Bernard, Moras, Dino, Yusupov, Marat

Journal:

Year:

2006

Language:

english

File:

PDF, 861 KB

english, 2006

46

The location of protein S8 and surrounding elements of 16S rRNA in the 70S ribosome from combined use of directed hydroxyl radical probing and X-ray crystallography

LANCASTER, LAURA, CULVER, GLORIA M., YUSUPOVA, GULNARA ZH., CATE, JAMIE H., YUSUPOV, MARAT M., NOLLER, HARRY F.

Journal:

Year:

2000

File:

PDF, 859 KB

2000

47

Structural basis for the inhibition of the eukaryotic ribosome

Garreau de Loubresse, Nicolas, Prokhorova, Irina, Holtkamp, Wolf, Rodnina, Marina V., Yusupova, Gulnara, Yusupov, Marat

Journal:

Year:

2014

Language:

english

File:

PDF, 6.61 MB

english, 2014

48

CryoâEM structure of the ribosome functional complex of the human pathogen Staphylococcus aureus at 3.2 Ã resolution

Golubev, Alexander, Fatkhullin, Bulat, Khusainov, Iskander, Jenner, Lasse, Gabdulkhakov, Azat, Validov, Shamil, Yusupova, Gulnara, Yusupov, Marat, Usachev, Konstantin

Journal:

Year:

2020

File:

PDF, 13.52 MB

2020

49

Primer Selection by HIV-1 Reverse Transcriptase on RNA – tRNA3Lysand DNA – tRNA3LysHybrids

Gulnara Yusupova, Jean-Marc Lanchy, Marat Yusupov, Gérard Keith, Stuart F.J. Le Grice, Chantal Ehresmann, Bernard Ehresmann, Roland Marquet

Journal:

Journal of Molecular Biology

Year:

1996

Language:

english

File:

PDF, 1.41 MB

english, 1996

50

Aminoglycoside interactions and impacts on the eukaryotic ribosome

Prokhorova, Irina, Altman, Roger B., Djumagulov, Muminjon, Shrestha, Jaya P., Urzhumtsev, Alexandre, Ferguson, Angelica, Chang, Cheng-Wei Tom, Yusupov, Marat, Blanchard, Scott C., Yusupova, Gulnara

Journal:

Proceedings of the National Academy of Sciences

Year:

2017

Language:

english

File:

PDF, 2.05 MB

english, 2017

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